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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM10G03200.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
C2H2 |
Protein Properties |
Length: 351aa MW: 38950.7 Da PI: 9.9011 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM10G03200.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.9 | 7.8e-05 | 44 | 66 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C Cgk+F+++ + H ++H
OGLUM10G03200.2 44 FACRVCGKRFPSQQAMAGHCSSH 66
78*****************9998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MSPMRPRSSS ASSTSPVAGK KEKTATKPAG GGARDPPKGR SSSFACRVCG KRFPSQQAMA 60 GHCSSHTRST AAATRITSAR QLLPPPPQSS LSPPPPLPVV ALTVQLAVLF WRLTPLLAAA 120 AVADWSQVAA GIPLSKEQLV VAVAIVVADD GQGQAAEVFL LDLAAEELNL GPSMNNEATS 180 IPKVRSVYEY FTEAFDLLKE DNVQWCPYME EETQRRAPAN LNTLYLRDSS YWLTKKMIVY 240 DIAVEVYNLQ RGDIAEELYS DTTSLWEKLR DNIAGSLEEM MSALDRMRQK CKRIMRRHRA 300 GMHQKSTVPQ DTGLRTPYWN NRLPLLGLPH RQDPQLPHVL GRRQGLWHRL R
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC097447 | 0.0 | AC097447.4 Oryza sativa Japonica Group chromosome 10 clone OSJNBb0042K08, complete sequence. |
GenBank | AC174464 | 0.0 | AC174464.1 Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence. |
GenBank | AK107618 | 0.0 | AK107618.1 Oryza sativa Japonica Group cDNA clone:002-131-D01, full insert sequence. |
GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |