PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G14740.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 207aa    MW: 21753.5 Da    PI: 9.3615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G14740.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.73.5e-13111434127
              NAM   4 Gfr..FhPtdeelvveyLkkkvegkkleleev..ikev.diykvePwdLpk.....kvkaeekewyfFskrdkkya...tgkrknratksgy.W 83 
                      Gfr  F P+d++l+++ L++k+++ +++   +  +++v d + + P +L +       +a+ + wyfFs r ++ a   +++ + ra+  g+ W
  OGLUM07G14740.1  11 GFRipFLPSDSDLLDCLLRPKIASGRVDSRFAplVHDVaDAFALPPAQLAAthapaPGAAGAEAWYFFSARPRARAragSNRAAARAVGGGRrW 104
                      6665599******************96553322599999**********843455422337789******99988832223345566667766* PP

              NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       + g +k+v        g  + + + + +a+  +  +W+m ey 
  OGLUM07G14740.1 105 CSVGAKKAVEG-----GGYCQRFRYKERTASGVVAPRWMMVEYG 143
                      *****999987.....57889999998888888899*******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.42510173IPR003441NAC domain
PfamPF023651.5E-912143IPR003441NAC domain
SuperFamilySSF1019418.5E-2315173IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MAPLADPAAE GFRIPFLPSD SDLLDCLLRP KIASGRVDSR FAPLVHDVAD AFALPPAQLA  60
ATHAPAPGAA GAEAWYFFSA RPRARARAGS NRAAARAVGG GRRWCSVGAK KAVEGGGYCQ  120
RFRYKERTAS GVVAPRWMMV EYGVAQEHDG EGVAQEHCGE GVAELVLCKI FRSPEPSRRP  180
ESGSPSSSSS ASASPSCSGG RKRKAAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658578.19e-53PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A0E0AK601e-144A0A0E0AK60_9ORYZ; Uncharacterized protein
STRINGOGLUM07G14740.11e-145(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017