PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA09G0163800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | BES1 | ||||||||
Protein Properties | Length: 146aa MW: 16718.6 Da PI: 6.5551 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 129.1 | 5.1e-40 | 45 | 127 | 3 | 84 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaags 84 ++r + +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+neV++AL+reAGwvv +DGtt++ +s+ + + + ++ ORGLA09G0163800.1 45 GRRGRAREEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINEVIAALAREAGWVVLPDGTTFPSSSSSVsQPPPTQQQ 127 57888899************************************************************887766333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.2E-36 | 46 | 127 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
CSSSSRRWRR MGVKEEEEEY YLEEEDEGEE ETRPPLQQQQ QVGLGRRGRA REEKERTKLR 60 ERQRRAITAR ILAGLRRHGN YNLRVRADIN EVIAALAREA GWVVLPDGTT FPSSSSSVSQ 120 PPPTQQQLQA AEPELSELEA KSHPVL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA09G0163800.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP005546 | 0.0 | AP005546.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OJ1003_C09. | |||
GenBank | AP014965 | 0.0 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015611670.2 | 1e-41 | beta-amylase 2, chloroplastic | ||||
Swissprot | O80831 | 7e-35 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | I1QRF9 | 4e-99 | I1QRF9_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA09G0163800.1 | 1e-100 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19695 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 8e-24 | beta-amylase 7 |
Publications ? help Back to Top | |||
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