PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA06G0151200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | BES1 | ||||||||
Protein Properties | Length: 355aa MW: 37379.3 Da PI: 8.5681 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 207.5 | 3.7e-64 | 15 | 164 | 2 | 149 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspe 91 g++r ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++ +g+sas sp+ ORGLA06G0151200.1 15 GGTRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGFKPPqaERPDPIGRSASPSPC 106 789***********************************************************************99999************* PP DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvsss 149 ss+q +sp++sy++sp+sssfps+ s+++i++ + +sl+p+l++l+l+ss ORGLA06G0151200.1 107 SSYQ--------PSPRASYNPSPASSSFPSSGSSSHITIGGNsliggvegSSLIPWLKTLPLSSSY 164 ****........***************************98899*****99*******99986664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 7.1E-69 | 15 | 158 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MTNGAGGGGG GGGLGGTRVP TWRERENNRR RERRRRAIAA KIYAGLRAYG NYNLPKHCDN 60 NEVLKALCNE AGWTVEPDGT TYRKGFKPPQ AERPDPIGRS ASPSPCSSYQ PSPRASYNPS 120 PASSSFPSSG SSSHITIGGN SLIGGVEGSS LIPWLKTLPL SSSYASSSKF PQLHHLYFNG 180 GSISAPVTPP SSSPTRTPRL RTDWENASVQ PPWASANYTS LPNSTPPSPG HKIAPDPAWL 240 AGFQISSAGP SSPTYNLVSP NPFGIFKEAI ASTSRVCTPG QSGTCSPVMG GMPAHHDVQM 300 VDGAPDDFAF GSSSNGNNES PGLVKAWEGE RIHEECASDE LELTLGSSKT RADPS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 7e-23 | 18 | 88 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 7e-23 | 18 | 88 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 7e-23 | 18 | 88 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 7e-23 | 18 | 88 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA06G0151200.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK101229 | 0.0 | AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015641160.1 | 0.0 | protein BZR1 homolog 3 | ||||
Swissprot | Q5Z9E5 | 0.0 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | I1Q2Z9 | 0.0 | I1Q2Z9_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA06G0151200.1 | 0.0 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-64 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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