PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB12G15180.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 332aa    MW: 36912.6 Da    PI: 10.8442
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB12G15180.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.4e-072002331750
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   A+rsR RK+++i+eLe++v++L++e  +   e++
  OB12G15180.1 200 AQRSRVRKLQYIAELERRVQALQTEGVEVSAEMD 233
                   89*********************99776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-6189248IPR004827Basic-leucine zipper domain
CDDcd147038.50E-16190240No hitNo description
SuperFamilySSF579594.61E-6199242No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-6200254No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MASSARSRGR GTRPTXXXXX XXXXXXXXXX XXXXXXXEAP ARPHGRPGHR RSSSDSFTLF  60
DGGNTAAAAA AGMYDNVFDG MRGGRGHQVG SWGGAPEFFP EQGSFGRPQG QGRPWDSRQM  120
IRHGGGGGMP VPMREMNGGH LAPPSTFGDH GHGPLPNGVD RKGHGDPAHD QRIGAERKEG  180
AQLRHSQSEA DTKRAKQQYA QRSRVRKLQY IAELERRVQA LQTEGVEVSA EMDFLGQQNI  240
MLDLENKALK QRLESLTQEH LIKRFQQEMF EREIGRLRSL FQQQQHPQQI PQQQAPTHSR  300
SNSRDLDSQF ANMSLKHGDP SPGRDAVPGL RI
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB12G15180.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2875550.0AK287555.1 Oryza sativa Japonica Group cDNA, clone: J065019F14, full insert sequence.
GenBankAK2877160.0AK287716.1 Oryza sativa Japonica Group cDNA, clone: J065134G21, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015698470.10.0PREDICTED: basic leucine zipper 6-like
TrEMBLJ3NC100.0J3NC10_ORYBR; Uncharacterized protein
STRINGOB12G15180.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.27e-48bZIP family protein