PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB11G10770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | WRKY | ||||||||
Protein Properties | Length: 184aa MW: 19396.3 Da PI: 4.1118 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 25 | 3.9e-08 | 9 | 53 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 sYYrCt + gC +kk v+r+++ + ++ Y +eH+++ OB11G10770.1 9 ESYYRCTNStdqGCGAKKTVQRNDDGGgggaARYTVAYISEHTCK 53 59*****988889**********9654232256788999999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118290 | 8.76E-8 | 9 | 53 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.8E-9 | 9 | 53 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.3E-6 | 10 | 54 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.7E-8 | 10 | 54 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MACEKAPGES YYRCTNSTDQ GCGAKKTVQR NDDGGGGGAA RYTVAYISEH TCKSVESVAP 60 VILETTIVPT AGSAAESVSP PTSSSSDIIT TTWSSTGSSW SGQHGDFCRQ LIASGDDCCW 120 DNTFTPTTAT SANSAVVQEM DLTGPIRSPV HMAVPDGNWM GYLVLNNDLI DDIFDGSINN 180 LFSF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB11G10770.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015619481.1 | 1e-38 | WRKY transcription factor SUSIBA2 | ||||
TrEMBL | J3N5J1 | 1e-133 | J3N5J1_ORYBR; Uncharacterized protein | ||||
STRING | OB11G10770.1 | 1e-134 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5760 | 30 | 58 |