PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB08G29600.1 | ||||||||
Common Name | LOC102700550 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 163aa MW: 17080.8 Da PI: 8.2218 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50 | 6.4e-16 | 87 | 136 | 11 | 60 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +kNRe+A rsR+RK+a+++eLe++v L aeN +L+++ +elk +++k + OB08G29600.1 87 MKNRESAERSRARKQAYLQELEQEVRLLRAENATLRDQCDELKALAEKAE 136 9*******************************************999865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.5E-5 | 87 | 141 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-11 | 87 | 129 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-12 | 87 | 133 | No hit | No description |
Pfam | PF00170 | 1.2E-12 | 87 | 135 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.71E-13 | 87 | 130 | No hit | No description |
PROSITE profile | PS50217 | 10.059 | 88 | 129 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MERAVTGTAG SSGGDDELVL PPAASEDALG LRLPSSRSYS SSGGGAGGAA GRRLAASLEQ 60 ELLYRAELHQ QQVASGGGGG RGGGGAMKNR ESAERSRARK QAYLQELEQE VRLLRAENAT 120 LRDQCDELKA LAEKAETEAP APAPTKPTCR GRHSRRSDQP VNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 84 | GGRGGGG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB08G29600.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006660364.1 | 1e-110 | PREDICTED: G-box-binding factor 4-like | ||||
TrEMBL | J3MV29 | 1e-109 | J3MV29_ORYBR; Uncharacterized protein | ||||
STRING | OB08G29600.1 | 1e-110 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |
Link Out ? help Back to Top | |
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Entrez Gene | 102700550 |