PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB08G14710.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 357aa    MW: 39368.5 Da    PI: 7.3947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB08G14710.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.1e-115392339
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
        bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39
                  ++k +rr+++NReAAr+sR+RKka+i++Le+   k ++Le
  OB08G14710.1 53 RDKIQRRLAQNREAARKSRLRKKAYIQNLETsrmKLAQLE 92
                  7899*************************97333444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.005451108IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-851100No hitNo description
PfamPF001701.2E-75388IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.6685395IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-75594No hitNo description
PROSITE patternPS0003605873IPR004827Basic-leucine zipper domain
PfamPF141442.3E-29139213IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MVVAPAHPVM TEPKFESQVA LPLQHGDEDD AALHDAPPRQ SSDSFDQEGS RPRDKIQRRL  60
AQNREAARKS RLRKKAYIQN LETSRMKLAQ LEQEITRARQ KGVYISSNSP PSLPAPIDSG  120
VATFELKYAH WVEEQNSQTR ELRAALQAGA SELQLKILVE AGLEHYEELF RAKSEAAKRD  180
VFFVMSGVWR TAAERFFLWI AGFRPSEVIK VLAPQLEAMT EEQVAKVQGL QQKARHLEDA  240
LSQGMDKLKQ TLADSMLAEA VASTSSGDDN AASPHDPSSA DGGGGGYMAQ MGSAMGRLNG  300
LVAFVDHADH LRLGTLQNMH RILTPRQAAQ GLLALGDYCQ RLRALSSLWA ARPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB08G14710.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8315140.0CT831514.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006659885.20.0PREDICTED: transcription factor TGA6-like
SwissprotQ6ZBS81e-152TGL10_ORYSJ; Transcription factor TGAL10
TrEMBLJ3MQU20.0J3MQU2_ORYBR; Uncharacterized protein
STRINGOB08G14710.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.61e-115bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]