PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB07G32300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 163aa MW: 18160.6 Da PI: 10.7988 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.6 | 3.7e-15 | 72 | 114 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L++ OB07G32300.1 72 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 114 79***************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-14 | 65 | 115 | No hit | No description |
SMART | SM00338 | 9.9E-16 | 68 | 137 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.542 | 70 | 115 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-12 | 72 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-12 | 72 | 117 | No hit | No description |
CDD | cd14707 | 9.49E-19 | 72 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 75 | 90 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MGVHTMSGGG SGGGGALSRQ GSVYSLTLNE VESHLGEPLR SMNLDDLLRT VAGRKRGASA 60 GADRVVEKTV ERRQKRMIKN RESAARSRAR KQAYTNELEN KISRLEEENQ RLREQKAVAD 120 FSTFPSCVDF LKAFLTQKLE PVMQIVPQPE PKQQLRRTNS ASF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 74 | RKRGASAGADRVVEKTVERRQK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB07G32300.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK110915 | 1e-140 | AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015694773.1 | 1e-100 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 7e-31 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | J3MP98 | 1e-115 | J3MP98_ORYBR; Uncharacterized protein | ||||
STRING | OB07G32300.1 | 1e-116 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 9e-24 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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