PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB07G21020.1 | ||||||||
Common Name | LOC102701093 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 24877.9 Da PI: 8.7166 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 37.3 | 8.2e-12 | 5 | 133 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkklel..eevikev.diykvePwdLpkkvka.....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 F P+d+el+++ L++k++g +++ +e + v d+y + P +L +++++ +++ wyfF++ ++ r+ +W + g+ k+v OB07G21020.1 5 PFLPQDSELLDCLLRPKIAGAHIDSrfTELVGYVdDVYALPPDQLAARHEGtpgegGDRVWYFFAPLGTARG---RTVGGDGGKRWCSVGSRKKVEG 98 599*******************65521455788889*********85333334444888*******987643...3443334557**********99 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+ + + L + +++a+ + W+m +y++ OB07G21020.1 99 GgAGAGGWYCQKLRYTEKTASGVVAPGWMMAQYSV 133 633444567899****99999999*********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.847 | 1 | 153 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.8E-20 | 5 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-7 | 5 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MAPVPFLPQD SELLDCLLRP KIAGAHIDSR FTELVGYVDD VYALPPDQLA ARHEGTPGEG 60 GDRVWYFFAP LGTARGRTVG GDGGKRWCSV GSRKKVEGGG AGAGGWYCQK LRYTEKTASG 120 VVAPGWMMAQ YSVAQEKGGE GGAELLLCKI FRSPRAEPGS PSSSKSASAS PSASCSGTGS 180 GGRKRKAKGD HLEAPPPSTR TQPFPPNAEA LKPEGAAPMN STANSAGSLL LNTSWHFD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB07G21020.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006658578.1 | 1e-173 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | J3ML20 | 1e-172 | J3ML20_ORYBR; Uncharacterized protein | ||||
STRING | OB07G21020.1 | 1e-173 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15395 | 10 | 17 |
Link Out ? help Back to Top | |
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Entrez Gene | 102701093 |