PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB07G11370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 133aa MW: 14545.1 Da PI: 4.6837 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.2e-11 | 88 | 132 | 1 | 45 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 e++++r rrk++NRe+ArrsR+R+++++eeLe+ ++eL ae++aL OB07G11370.1 88 EERRRRLRRKISNRESARRSRERRRQRVEELERAADELRAERRAL 132 68899*************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-9 | 85 | 132 | No hit | No description |
Pfam | PF00170 | 1.6E-7 | 88 | 132 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.864 | 90 | 133 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.37E-6 | 92 | 132 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MLSLHEAMQL DFELQDMDVR FGFGLGFGIE AAVVGSDVTV SDDAAGLPPV VGVVGVRKID 60 DATGGDEGSG GGGGVLLYCD GGGEEDDEER RRRLRRKISN RESARRSRER RRQRVEELER 120 AADELRAERR ALA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB07G11370.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP003702 | 2e-54 | AP003702.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1007_H09. | |||
GenBank | AP005309 | 2e-54 | AP005309.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0474G09. | |||
GenBank | AP014963 | 2e-54 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. | |||
GenBank | CU406121 | 2e-54 | CU406121.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C108M06, full insert sequence. | |||
GenBank | CU406481 | 2e-54 | CU406481.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C103G11, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | J3MIA5 | 8e-85 | J3MIA5_ORYBR; Uncharacterized protein | ||||
STRING | OB07G11370.1 | 1e-85 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16831 | 9 | 9 |