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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OB06G26630.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GATA |
Protein Properties |
Length: 355aa MW: 37536.7 Da PI: 10.1835 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OB06G26630.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 54.7 | 1.4e-17 | 208 | 241 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
OB06G26630.1 208 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 241
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009416 | Biological Process | response to light stimulus |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0009910 | Biological Process | negative regulation of flower development |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010255 | Biological Process | glucose mediated signaling pathway |
GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MSAIYMSQLS AALPLMEVDH HHRHHQDHHQ GHFQAFSLQP KDPPILFPFV ISSSSSSSSS 60 LSDTTTLSYG SDHHLMQQQQ QHRAMLEPQH MIGGSPAGIF AAPFPTVESI RDDMIERSPF 120 DPYDTEKLQV NCGSAKVVTG GGGWSAVPAA KMKITRKMGE PSGVTNGAAA AAPKKPRRRA 180 QAYEDHPGHG GGAGGGAMGQ AFGVIRVCSD CNTTKTPLWR SGPCGPKSLC NACGIRQRKA 240 RRAMMASGPP ASPNTGAKAA AAQSDATVAA QPKVKKEKRA DVDRSLPFKK RCKIVQLPAI 300 TGGSLLRGGA VGAGRDHGRR HAAHDAVLRA CPELKDPPDP ATISLLAPSH APIHP
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK069851 | 0.0 | AK069851.1 Oryza sativa Japonica Group cDNA clone:J023034D16, full insert sequence. |