PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OB06G16510.1

Organism

Oryza brachyantha

Taxonomic ID

4533

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 216aa MW: 23726.4 Da PI: 9.944

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OB06G16510.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.1	2.1e-14	136	190	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++ +L+ ++ ++++k k+e OB06G16510.1 136 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQ---KKQVEMIQKQKDE 190 79*************************************998...5555555555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-12	132	197	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	134	179	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.4E-11	136	180	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-14	136	188	No hit	No description
CDD	cd14707	8.79E-24	136	190	No hit	No description
SuperFamily	SSF57959	1.75E-10	136	181	No hit	No description
PROSITE pattern	PS00036	0	139	154	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MEMPPEESAL ARQGSIYSLT FDEFQSALGT AGKDFGSMNM DELLRNIWTA EESQALFSQS 60 NVVAPAMQLG NGMVPGVVGQ GAAAAMTVAA PATPVVLNGL GKVEGGDLSS LSPVPYPFDT 120 ALRVRKGPTV EKVVERRQRR MIKNRESAAR SRARKQAYIM ELEAEVAKLK EQKAELQKKQ 180 VEMIQKQKDE VMERITQQLG PKAKRFCLRR TLTGPC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130, ECO:0000269\|PubMed:26300907, ECO:0000269\|PubMed:27468891}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	OB06G16510.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK103188	0.0	AK103188.1 Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence.
GenBank	AK105312	0.0	AK105312.1 Oryza sativa Japonica Group cDNA clone:001-117-D06, full insert sequence.
GenBank	GU552783	0.0	GU552783.1 Oryza sativa Japonica Group putative expressed bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015693494.1	1e-142	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q69TW5	2e-93	BZP46_ORYSJ; bZIP transcription factor 46
TrEMBL	J3MCA7	1e-156	J3MCA7_ORYBR; Uncharacterized protein
STRING	OB06G16510.1	1e-157	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.2	2e-32	abscisic acid responsive elements-binding factor 3

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Hossain MA, et al. The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice. J. Plant Physiol., 2010. 167(17): p. 1512-20 [PMID:20576316] Yang X, et al. Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes. Plant Physiol., 2011. 156(3): p. 1397-409 [PMID:21546455] Li YS, et al. A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice. Mol. Biotechnol., 2013. 54(2): p. 703-10 [PMID:23086454] Guo C,Ge X,Ma H The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Mol. Biol., 2013. 82(3): p. 239-53 [PMID:23686450] Huang X, et al. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). ScientificWorldJournal, 2014. 2014: p. 809353 [PMID:25089296] Kim N, et al. Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts. Front Plant Sci, 2015. 6: p. 614 [PMID:26300907] Chen H, et al. Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice. Genet. Mol. Res., 2015. 14(4): p. 11994-2005 [PMID:26505346] Tang N, et al. MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice. Plant Cell, 2016. 28(9): p. 2161-2177 [PMID:27468891]