PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB05G33790.1
Common NameLOC102703493
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 380aa    MW: 40533.6 Da    PI: 9.7946
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB05G33790.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.36.2e-22245307163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e+elkrerrkq+NRe+ArrsR+RK+ae+e L++ v++L+aeN++L++e+++l+++++kl+ e+
  OB05G33790.1 245 ERELKRERRKQSNRESARRSRLRKQAETEDLATQVESLTAENTSLRSEISRLSENSEKLRLEN 307
                   89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.5E-30193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.3E-16243304No hitNo description
PfamPF001702.3E-20245307IPR004827Basic-leucine zipper domain
SMARTSM003388.2E-22245309IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.334247310IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-11248303No hitNo description
CDDcd147021.69E-22250298No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MAHDEAIATQ KTGKTSSPPK DQPTPGPFPD WSAVQAYYGP GVLPPTYFAP AIAPGHAPPP  60
YMWGPQPIMP PHFGTPYAAM YPHGGAYPHP LMPMMANPLS MEPAKSANSK EKGSNKKLKE  120
VDGAAVSTGS GDSKRTMTSS GDYSAEGSSD VNDVKVGKTA KKRRSDDGAG AETTAAAKME  180
NALAPSHILG STAIMPNHCF PAQVIKPTAT NVANSRALGT PISPQPAVIV PSQAGVSTEL  240
LNKDERELKR ERRKQSNRES ARRSRLRKQA ETEDLATQVE SLTAENTSLR SEISRLSENS  300
EKLRLENSAL MGKLKDPAAS THAETSLPKT TTASSPRVVE NFLSMIDNTN KTNVRHTEHG  360
EPKLRQLLGK SPATDVVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261267RRSRLRK
2261268RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB05G33790.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0654400.0AK065440.1 Oryza sativa Japonica Group cDNA clone:J013020K21, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006654807.10.0PREDICTED: common plant regulatory factor 1-like
RefseqXP_015693307.10.0PREDICTED: common plant regulatory factor 1-like
TrEMBLJ3M9V50.0J3M9V5_ORYBR; Uncharacterized protein
STRINGOB05G33790.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-52G-box binding factor 3