PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB05G22510.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MYB_related
Protein Properties Length: 206aa    MW: 22495.5 Da    PI: 6.7953
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB05G22510.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.86e-143275145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     + +W++ Ed ll ++v+++G  +W +Ia ++g gR++ +c++rw 
     OB05G22510.1 32 KVAWSAHEDGLLRELVREHGDSRWGLIAGKLG-GRSARSCQNRWA 75
                     568*****************************.***********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.9042782IPR017930Myb domain
SMARTSM007176.6E-113180IPR001005SANT/Myb domain
SuperFamilySSF466896.65E-123180IPR009057Homeodomain-like
PfamPF002492.3E-123275IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.1E-143276IPR009057Homeodomain-like
CDDcd001671.18E-123474No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MAALEEGGAS GGAGEGPPPA PRKEQKATKS TKVAWSAHED GLLRELVREH GDSRWGLIAG  60
KLGGRSARSC QNRWARIRRN RNTLPLFPLT LGFEDQSPRQ APPLVVFRED DDDIPRHRRG  120
SGDAPECLVL FPLAPSLDVV RDNAASTTST AMDVDSEEVR LLTELRLAPP AMNVVFDARP  180
LQALPMNLPK YNITATPLED SGVLRF
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB05G22510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLJ3M6M71e-147J3M6M7_ORYBR; Uncharacterized protein
STRINGOB05G22510.11e-147(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.19e-09myb domain protein 119