PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB03G42590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 191aa MW: 21242.3 Da PI: 5.9309 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.3 | 9.1e-10 | 62 | 102 | 1 | 41 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 e+e++r+rrk++NR++A+rsR+RK+ ++eeL+e ++ L ae OB03G42590.1 62 EEERRRQRRKISNRLSAQRSRARKQRRLEELRETSARLRAE 102 7899**********************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-8 | 59 | 102 | No hit | No description |
Pfam | PF00170 | 1.9E-6 | 62 | 102 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.599 | 64 | 127 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.75E-6 | 66 | 104 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 84 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.93E-9 | 71 | 102 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MLPVHEALDF DLDVMTSGFG FTPWAPDTCP TLEQLMATAA SPASTSSDDV SAACGGGTVE 60 EEEERRRQRR KISNRLSAQR SRARKQRRLE ELRETSARLR AESXXXXXXX XXXXXXXXXX 120 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX PPPPPGGAPG 180 AAAAVLASLM A |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB03G42590.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008665488.1 | 7e-26 | ocs element-binding factor 1-like | ||||
TrEMBL | J3LT83 | 1e-64 | J3LT83_ORYBR; Uncharacterized protein | ||||
STRING | OB03G42590.1 | 2e-65 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |