PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB02G45490.1 | ||||||||
Common Name | LOC102715456 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 141aa MW: 15109.1 Da PI: 9.3149 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.6 | 4.8e-17 | 67 | 126 | 1 | 60 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 e+e ++++r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk ++lk e+a+l OB02G45490.1 67 EEEERKTIRMMKNRESALRSRARKRAYVQELEKEVHRLVNENLKLKRHCKQLKTEMAALI 126 678899***********************************************9999885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-17 | 65 | 126 | No hit | No description |
PRINTS | PR00041 | 2.4E-5 | 66 | 82 | IPR001630 | cAMP response element binding (CREB) protein |
Pfam | PF00170 | 1.9E-14 | 67 | 125 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.4E-14 | 67 | 131 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.484 | 69 | 125 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.9E-13 | 71 | 127 | No hit | No description |
CDD | cd14707 | 7.29E-16 | 71 | 125 | No hit | No description |
PRINTS | PR00041 | 2.4E-5 | 84 | 104 | IPR001630 | cAMP response element binding (CREB) protein |
PRINTS | PR00041 | 2.4E-5 | 104 | 121 | IPR001630 | cAMP response element binding (CREB) protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MADQLGGMGS PQLSLSSCSS FLSISSAGNS AADGAPHLSL GVGGAEELDL LMQVGIGGGG 60 GGGGDEEEEE RKTIRMMKNR ESALRSRARK RAYVQELEKE VHRLVNENLK LKRHCKQLKT 120 EMAALIQPTT KQSSHRRSSS T |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB02G45490.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK061086 | 0.0 | AK061086.1 Oryza sativa Japonica Group cDNA clone:006-206-G05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006648186.1 | 1e-97 | PREDICTED: protein FD-like | ||||
TrEMBL | J3LIT2 | 2e-96 | J3LIT2_ORYBR; Uncharacterized protein | ||||
STRING | OB02G45490.1 | 4e-97 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-13 | bZIP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 102715456 |