PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB01G46760.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 306aa    MW: 33132.7 Da    PI: 7.789
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB01G46760.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.9e-13222267550
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   +r+rr++kNRe+A rsR+RK+a++ eLe +   L++eN +L++  +
  OB01G46760.1 222 RRQRRMIKNRESAARSRARKQAYTVELEAELNYLKQENARLRDAEK 267
                   79***************************************96544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-13218283IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.657220263IPR004827Basic-leucine zipper domain
PfamPF001701.7E-10222268IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-10222266No hitNo description
CDDcd147073.03E-22222276No hitNo description
Gene3DG3DSA:1.20.5.1707.1E-13222265No hitNo description
PROSITE patternPS000360225240IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010152Biological Processpollen maturation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MASEMSKNMK AADDQEVTSQ ERDQSGGTKA DGEEQVAPLA RQSSILSLTL EELQNSLCEP  60
GRNFGSMNMD EFVANIWNAE EFQAATGGCK GAMEETKAAG VVRGSFSGQA PMAAGMVHGP  120
VNPMQQGQAG PMMFPMAPAN TIYPVMGDGM GYPGGYNGMA VVPPPPPAQG AIAALSPGSS  180
DGMSAMTHAD MMNCIGNGMI IENGTRKRPH REDGCAEKTV ERRQRRMIKN RESAARSRAR  240
KQAYTVELEA ELNYLKQENA RLRDAEKTIL LTKKQMLVEK MMEQSKEKMN AKKGGSQLRR  300
CGSCVW
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269|PubMed:17604002, ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB01G46760.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0709980.0AK070998.1 Oryza sativa Japonica Group cDNA clone:J023078J23, full insert sequence.
GenBankEF1996310.0EF199631.1 Oryza sativa (japonica cultivar-group) bZIP-type transcription factor ABI5 isoform 2 (ABI5) mRNA, complete cds, alternatively spliced.
GenBankJQ0018180.0JQ001818.1 Oryza sativa Japonica Group ABRE-binding bZIP transcription factor (OREB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006645053.11e-137PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5
SwissprotQ8RZ351e-137ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBLJ3L6200.0J3L620_ORYBR; Uncharacterized protein
STRINGOB01G46760.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38303558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.11e-27bZIP family protein
Publications ? help Back to Top
  1. Zou M,Guan Y,Ren H,Zhang F,Chen F
    A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance.
    Plant Mol. Biol., 2008. 66(6): p. 675-83
    [PMID:18236009]
  2. Kim H, et al.
    A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth.
    J. Exp. Bot., 2012. 63(2): p. 1013-24
    [PMID:22071266]
  3. Bhatnagar N, et al.
    The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10.
    Plant Mol. Biol., 2017. 93(4-5): p. 389-401
    [PMID:28000033]