PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB01G43330.1
Common NameLOC102718125
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 470aa    MW: 51221.4 Da    PI: 6.9759
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB01G43330.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10185225545
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                   k  rr+++NReAAr+sR+RKka+i++Le+   +L++  ++L
  OB01G43330.1 185 KTLRRLAQNREAARKSRLRKKAYIQNLETSRLKLTQLEQEL 225
                   788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.3E-10181244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151183227IPR004827Basic-leucine zipper domain
CDDcd147081.88E-22185237No hitNo description
PfamPF001702.0E-7185225IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.59E-7185228No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-7186229No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141441.1E-33267342IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MDSRLGGAAA GAAAASDARG GMSAGLAAPH HASHTNVNNM QHTQVTDFGA LAQSAGFRIE  60
DLANLSTNSL FNLKSNAHTI INDPLQFGNY GKSIPPSNIT TTAAVTVVDP QTLVPEMGAQ  120
LNLATIRTGN VENWGESTMA DTSPRTDTST DPDTDERNQM FEQGQLAAPT ASDSSDRSKD  180
KLDHKTLRRL AQNREAARKS RLRKKAYIQN LETSRLKLTQ LEQELQRARQ QGIFISTTGD  240
QSHSVSGNGA LAFDMEYARW LEEHNKHINE LRAAVNSHAS DNDLRSIVDN IMAHYDEIFK  300
LKGVAAKADV FHVLSGMWKT PAERCFMWLG GFRSSELLKL LAGQLEPLTE QQLAGIANLQ  360
QSSQQAEDAL SQGMEALQQS LAETLASGSL GPAGSSGNVA NYMGQMAMAM GKLGTLENFL  420
RQADNLRLQT LQQMQRILTT RQSARALLAI SDYFSRLRAL SSLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB01G43330.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6204150.0AY620415.1 Oryza sativa (japonica cultivar-group) clone P0702B09 bZIP transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006644874.20.0PREDICTED: transcription factor HBP-1b(c1)-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLJ3L5270.0J3L527_ORYBR; Uncharacterized protein
STRINGOB01G43330.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-140bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]