 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART11G23660.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GRAS |
| Protein Properties |
Length: 446aa MW: 51223.3 Da PI: 4.6917 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART11G23660.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 281.8 | 2e-86 | 126 | 436 | 73 | 373 |
GRAS 73 nsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetger 164
++++ l+a+klf ++ i k+s++ N++Il+av+g++++Hi+D+++s+G+QWp L++ L++R++gpp++RiTg++ p++g ++++eetg+r
OBART11G23660.1 126 STVDFLKAYKLFAAACCIKKVSFIFSNKTILDAVAGKRKLHIVDYGLSYGFQWPGLFKCLSEREGGPPEVRITGIDFPQPGfrPADQIEETGRR 219
38899***************************************************************************9************* PP
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkp.......gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhn 249
L++ A+++gvpf+f++ +a ++e+++ e+L++++ +E+l+Vn+ + l l desv ++s +rd vL+ +++++P+v+v + + ++
OBART11G23660.1 220 LSNCARQFGVPFRFQA-IAAKWETVRREDLHLDReeeeeeeEEVLVVNCLHFLNALQDESVVVDSpsPRDMVLNNIRDMRPHVFVQCVVNGAYG 312
****************.799**********9999999999999*****************98888779************************** PP
GRAS 250 sesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
++ Fl+rf e+l +ys+ fd+l+a++pr+++er +Er +lgr++ nv+acega+r+ r et+++W r ++aG++++pl+ ++++ ++ ++k
OBART11G23660.1 313 APFFLTRFRETLFFYSSQFDMLDATIPRDNDERLLIERDILGRWALNVIACEGADRVDRPETYKQWLVRNHRAGLTQLPLQPQVVELVRDKVKK 406
********************************************************************************************** PP
GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaW 373
+ + + ++ ++++l++gWk+r L+++S W
OBART11G23660.1 407 LYHKDFVIDVDHNWLLQGWKGRILYAMSTW 436
**888************************* PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MAAAAPQLEE LVDLEPFSPS LFLDLPPTPH GDDPNDDDLI LPFISRMLME DDIDDKFFYQ 60
FPDHPALLHA QQPYAQILDA PSDDTTTNSS DDSKDLKLLF SAADNMEMLN MAFLKGREEA 120
NKLCTSTVDF LKAYKLFAAA CCIKKVSFIF SNKTILDAVA GKRKLHIVDY GLSYGFQWPG 180
LFKCLSEREG GPPEVRITGI DFPQPGFRPA DQIEETGRRL SNCARQFGVP FRFQAIAAKW 240
ETVRREDLHL DREEEEEEEE EVLVVNCLHF LNALQDESVV VDSPSPRDMV LNNIRDMRPH 300
VFVQCVVNGA YGAPFFLTRF RETLFFYSSQ FDMLDATIPR DNDERLLIER DILGRWALNV 360
IACEGADRVD RPETYKQWLV RNHRAGLTQL PLQPQVVELV RDKVKKLYHK DFVIDVDHNW 420
LLQGWKGRIL YAMSTWVADR DHKSLF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC137064 | 0.0 | AC137064.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence. |
| GenBank | AK102199 | 0.0 | AK102199.1 Oryza sativa Japonica Group cDNA clone:J033087D22, full insert sequence. |
| GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
