PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART08G22810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 155aa MW: 16572.4 Da PI: 9.2238 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.2e-15 | 77 | 132 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r rr++kNRe+A rsR+RK+a+++eLe++v L aeN aL+ + +lk +a+ + OBART08G22810.1 77 RRKRRAMKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQLKAAAAEAE 132 699**********************************************9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-11 | 73 | 137 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.553 | 75 | 125 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-13 | 77 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-13 | 77 | 130 | No hit | No description |
CDD | cd14707 | 4.76E-16 | 77 | 125 | No hit | No description |
SuperFamily | SSF57959 | 3.31E-11 | 77 | 126 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 80 | 95 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MERAAGTGSG GDDDELVLPP ASFQDGLPSS RSYPSCIGGG SAAAASASLE RELLYRAELH 60 QQQQQQQQLG GGGGVERRKR RAMKNRESAE RSRARKQAYL QELEQEVRLL RAENAALRHQ 120 CHQLKAAAAE AEAEAAAAAA AAKKPTIQRT SSATF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT836023 | 0.0 | CT836023.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN045B18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649649.1 | 1e-69 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
Swissprot | Q84JK2 | 2e-14 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A0D3H2X6 | 1e-104 | A0A0D3H2X6_9ORYZ; Uncharacterized protein | ||||
STRING | OBART08G22810.1 | 1e-104 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 3e-08 | bZIP family protein |