PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART07G09860.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 465aa MW: 50295.3 Da PI: 8.7356 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 47.9 | 3.4e-15 | 91 | 226 | 130 | 265 |
XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T..TT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGH CS EIN3 130 sseshslselqDTtlgSLLsalmqhcdppqrrfpl..ekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmspti 221 ss +s l D l + + lm+ c ppq +pl + + pPWWPtG+e+ww+elg+ + ppy+ l ka k v a +k + p++ OBART07G09860.2 91 SSLAMAVSGLADHVLERMVKVLMRKCHPPQALYPLigKSPLRPPWWPTGREQWWPELGAGA--VVPPYRPAPLLSKAEKEVVVVAMVKNLVPDF 182 556666777888888888999*************95456799*************999764..468***999********************** PP HHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS EIN3 222 eeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265 e++ +r ++ ++++ e a+ + e++ + ++h OBART07G09860.2 183 ERLFMAVRMAPSVTSRITDAEARAWDDGVAGERETYMARHPHRT 226 *************************9999999888888888743 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 1.7E-39 | 89 | 224 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 6.2E-18 | 93 | 209 | No hit | No description |
SuperFamily | SSF116768 | 7.85E-45 | 94 | 219 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence Send to blast |
MDASKKSVMT KEEQQLSPAA SPAAAVMTAE ADAINEEQDK AAAATTADHT APPPPPPPAA 60 AVADHAVEMD MASGSGVAHL APPAVAPAPR SSLAMAVSGL ADHVLERMVK VLMRKCHPPQ 120 ALYPLIGKSP LRPPWWPTGR EQWWPELGAG AVVPPYRPAP LLSKAEKEVV VVAMVKNLVP 180 DFERLFMAVR MAPSVTSRIT DAEARAWDDG VAGERETYMA RHPHRTTPTR AWKLMDSLKP 240 EAVRMKLKAP KPKPQVTIKV EDAAPFLTVS AAADPAAVEA AMGAIEAMRN SSKDPDAPYY 300 PMPSPLHGHN EVGPNDYPEN PAIWKEFNRK EGQLDLLRVG KKNDRMAISD RVDGGASGSG 360 PRKGYLVMKT YKKAQEYYRE LRNKGAMASG AGVKIEDDSE TESDNEDEKA YEKAKAKAKA 420 RAVYQQNKGV KTEDQSETES DNKDEQAKVM AKAKGRVIPG PNKGI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 6e-16 | 95 | 207 | 10 | 121 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP005172 | 0.0 | AP005172.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01. | |||
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015646400.2 | 0.0 | uncharacterized protein LOC107276281 | ||||
TrEMBL | A0A0D3GPH9 | 0.0 | A0A0D3GPH9_9ORYZ; Uncharacterized protein | ||||
STRING | OBART07G09860.2 | 0.0 | (Oryza barthii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-14 | ETHYLENE-INSENSITIVE3-like 3 |