PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART07G07520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 330aa MW: 35349.9 Da PI: 6.9164 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 42.4 | 1.6e-13 | 106 | 192 | 152 | 227 |
S.SSSSS-..TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHT CS EIN3 152 m.qhcdpp..qrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirel 227 m q c+pp rr ++ +pPWWP+ +e wwg+ +++ g + p+ p+ l ka kv+vL av++h++p++ ++ OBART07G07520.1 106 MaQECTPPlvARRDRKSGATpppPPPWWPKAEEPWWGTEVAAHLRGrrmatPVPFASPRRLAKAEKVAVLVAVVRHVAPDFGRLAAA 192 44888888553555555555111578***********6654444447899888***************************9987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-29 | 85 | 197 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.4E-33 | 88 | 197 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 4.9E-14 | 89 | 195 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MASSSSGKRV SSSSTSSHQQ HAKRRRRAPG DELSQTHGVA RNAVAAMPMV GVAPLMLSPV 60 TMQAQLLCYV AMPMAPVAGG GGGGVPLAAA LCRLRNGTLE RMVREMAQEC TPPLVARRDR 120 KSGATPPPPP PWWPKAEEPW WGTEVAAHLR GRRMATPVPF ASPRRLAKAE KVAVLVAVVR 180 HVAPDFGRLA AAAGRVQADR ARVLHMGERA PRRAQAPLRR PEPESADQTA VDFSVSGEDT 240 VTTGPELEQL VGDGNGATVE GEGQKTEDSP VPPLLEQHGG EDHDHHRQHG GFSGEVSGAA 300 PEDVDWFDYD EVLRGLDELE IPSFFGGYYI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP003740 | 0.0 | AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03. | |||
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015645905.1 | 1e-165 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A0D3GNR5 | 0.0 | A0A0D3GNR5_9ORYZ; Uncharacterized protein | ||||
STRING | OBART07G07520.1 | 0.0 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP18049 | 8 | 8 |