 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART06G19060.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 390aa MW: 40906.4 Da PI: 9.5212 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART06G19060.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.5 | 1.6e-17 | 203 | 236 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
OBART06G19060.1 203 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 236
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010255 | Biological Process | glucose mediated signaling pathway |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MSTIYMSQLS AALPLMEGEH HHHHQDHHQG HFQAFSMQPK DPPVLFPFVI SRRSSSSSPS 60
DSTTLSYGSD HHLTQQQQHQ HQALLEPQHM IGGSSAGIFA TPFPTVESIR DDMIERSPFD 120
PYDTDKLQAS CGLAKVVAGG KWSAVPAAKM KITRKMGEPS SGVTGGAATT AAPKKPRRRP 180
AQAYEDHGHG GAMGQAFGVI RVCSDCNTTK TPLWRSGPCG PKSLCNACGI RQRKARRAMM 240
ASGLPASPNA AGPKAAAAAA AAAQPKVKKE KRADVDRSSL PFKKRCKAVQ VEDHQTPPAA 300
TNAAAAAAIE ETAESATVAP PPAPAMRGGT LVDSIGLSWS KTHAAATAAA TASCSFRPSP 360
VAPGFAAAVQ DEITDAAMLL MTLSCGLVRS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 172 | 179 | PKKPRRRP |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK069851 | 0.0 | AK069851.1 Oryza sativa Japonica Group cDNA clone:J023034D16, full insert sequence. |
