 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART01G08800.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 356aa MW: 36894.5 Da PI: 4.7194 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART01G08800.3 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 33.7 | 7.8e-11 | 209 | 235 | 1 | 28 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28
k +++WtpeLH+rFv+aveqL G++kA
OBART01G08800.3 209 KVKVDWTPELHRRFVQAVEQL-GIDKAA 235
5689*****************.898886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MLEVSTLRSP KADQRAGVGG HHVVGFVPAP SPADVADEVD AFIVDDSCLL EYIDFSCCDV 60
PFFHADDGDI LPDLEVDPTE LLAEFASSPD DEPPPTSAAS PGEPAAAGGA KEDVKEDGAA 120
AAADYDGSPP PPRGKKKDEE ERSSSLLEEK DAKNGGGGGD EVLSAVTTED SSAGAAKSSS 180
PSAEGHSKRK PSSSSSSAAA GKNSHGKRKV KVDWTPELHR RFVQAVEQLG IDKAAARKWG 240
PQAVTPGTPC MPPPLPPAAM LQRFPVPPVP GMVPHPMYRP IPPPLPPQGN KLAALQLQLD 300
AHPSKESIDA AIGDVLVKPW LPLPLGLKPP SLDSVMSELH KQGIPKVPPA ASGAAG
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CT834042 | 0.0 | CT834042.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220E01, full insert sequence. |
| GenBank | CT834043 | 0.0 | CT834043.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI203A14, full insert sequence. |
| GenBank | CT834044 | 0.0 | CT834044.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI210C09, full insert sequence. |
