PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009628790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 20751.7 Da PI: 8.6522 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.8 | 8.1e-05 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L +H +H XP_009628790.1 70 FECKTCNKRFPSFQALGNHRASH 92 89*****************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 1.2E-11 | 70 | 94 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.022 | 70 | 92 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.429 | 70 | 97 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 4.1E-8 | 70 | 136 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 72 | 92 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.8E-5 | 114 | 138 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 7.5 | 114 | 136 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 116 | 136 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MAAANHTYIV CFVRKQCRKE EENSEISGIK RSREEDRQVE AEAMANCALT LLSRLNNNAT 60 STDRDYHNDF ECKTCNKRFP SFQALGNHRA SHKRPKLLAG AGDFLVQSKK NKMHECYICG 120 MEFYLGQALG GHMIRHQKTS SSVARKTKTQ VTGIIFCCLD LNLTPDENVE LKLWPTAPVS 180 SPVL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018634102.1 | 1e-118 | PREDICTED: zinc finger protein ZAT12-like | ||||
Swissprot | Q9SLD4 | 2e-23 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A1S4B2N5 | 9e-84 | A0A1S4B2N5_TOBAC; zinc finger protein ZAT12-like | ||||
STRING | XP_009628790.1 | 1e-138 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA366 | 24 | 150 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 5e-32 | C2H2 family protein |