PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009627598.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 175aa    MW: 20110.6 Da    PI: 7.7697
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009627598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-2089139155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++k +g+WvAe+rd      k+ r++lg+f+taeeAa a+++a  +++g
  XP_009627598.1  89 KKYRGVRQRK-WGKWVAEVRDtR----KKNRIWLGTFDTAEEAALAYDKAVIEMRG 139
                     59*******9.*******99933....359***********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.45E-3089145No hitNo description
PfamPF008472.9E-1590139IPR001471AP2/ERF domain
SMARTSM003803.7E-3490153IPR001471AP2/ERF domain
PROSITE profilePS5103221.60190147IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-2190146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-2990145IPR001471AP2/ERF domain
PRINTSPR003671.1E-1191102IPR001471AP2/ERF domain
PRINTSPR003671.1E-11113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MASKEEHQEN EAIEKPSKPD EIEKSTNQVR ESSAILPPLV RIHDSPNDKE EKDEGEKSEQ  60
HEKTREKTII IENEKTEVIS KEKTKGNAKK YRGVRQRKWG KWVAEVRDTR KKNRIWLGTF  120
DTAEEAALAY DKAVIEMRGV DAFTNILKPP PREPPPKEIN FINPPPSSSK DDARV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-19901461471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016500458.11e-122PREDICTED: ethylene-responsive transcription factor CRF2-like
TrEMBLA0A1S4CH451e-120A0A1S4CH45_TOBAC; ethylene-responsive transcription factor CRF2-like
STRINGXP_009627598.11e-122(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-25cytokinin response factor 4