PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009625172.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 409aa    MW: 45706.8 Da    PI: 4.7005
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009625172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.2e-1698143352
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                      kGVr +k +g+++AeIrdps+    kr++lg+f+t + Aa+a++a + +
  XP_009625172.1  98 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFDTVKAAAEAYDAKKAE 143
                     79****99.**********964...3*******************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.4997159IPR001471AP2/ERF domain
PfamPF008478.8E-1097143IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1597144IPR016177DNA-binding domain
PRINTSPR003671.9E-698109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-1999143IPR001471AP2/ERF domain
CDDcd000183.94E-1999139No hitNo description
SMARTSM003807.2E-1499151IPR001471AP2/ERF domain
PRINTSPR003671.9E-6120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MPCLPQELFD MMSNKERVND GCMGSVRKVR IIYDDPDATE SDSENDHNIR NVVRIKRVVK  60
EVNISSASLE KDLEKCSVKS SKKSLENKRA QIKSSSLPKG VRMRKWGKYA AEIRDPSQGK  120
RIWLGTFDTV KAAAEAYDAK KAEFDRRILS EIGKNLSSPR APPDCSMACS SHLTNRISSL  180
YSHPSPSSVL DVPTSSAAAA VECIDIPMKD TNPMPVLEVE QPASEMLEKQ LLLPPSGCQD  240
FNPRFEDQML YEDPLIVQGT ISNSLVEMTE FSITKKTKAR QPTIEICQKS TKGIEDRHVN  300
CTDQSITSPS ISAELNMMNF EETAVSGNNL KLLGLDENVL FGKDFTQTFD PYTDFIGLDT  360
NFLCCDGMEE FVYGVNEDFR DNVGAKSPKL DEVELKWLDE VLIQDQSVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009625172.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
TrEMBLA0A1S3X4T40.0A0A1S3X4T4_TOBAC; ethylene-responsive transcription factor CRF6-like
STRINGXP_009625172.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127181519
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-13ERF family protein