PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009624644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 36741.7 Da PI: 4.507 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 112 | 159 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr++k +g+W+AeIrd + + +r++lg++ taeeA a++ r+++ XP_009624644.1 112 KYRGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYNTAEEASLAYETKRLEF 159 8*******9.**********55.....45*******************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 19.994 | 112 | 169 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-22 | 112 | 160 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.7E-20 | 112 | 174 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.42E-17 | 112 | 161 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 4.2E-12 | 112 | 159 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.83E-24 | 112 | 152 | No hit | No description |
PRINTS | PR00367 | 4.1E-10 | 113 | 124 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.1E-10 | 135 | 151 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MFEPQKQPQK SKNRVETGQP MRKIRIVCND PDATDSSDDE RVNDIKPKVK RFVREITLPI 60 GNISPKKSKV KIPVETTESS CQDSNNGEKN PKKKRVLAKT PSSNQQRLSP GKYRGVRQRK 120 WGKWAAEIRD PFKGRRVWLG TYNTAEEASL AYETKRLEFD SMAKNNNNSS SNVSEKSSNN 180 EENSAESLVS HTSHTFPASV LEMDSLTSTS EVNDKRPDEK AKDELGLMED SLSLAEIGAG 240 IEFDVEMDLF FAGSDDFGQN LDDFVVNDFE DLPIYGLEGD EQLPTGLPDF DFDFDFDGYN 300 ESCAWMDEVT AAPLMNGTTT PLNIALCP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 9e-15 | 113 | 153 | 3 | 44 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009624644.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF119-like | ||||
TrEMBL | A0A1S3Y2U4 | 0.0 | A0A1S3Y2U4_TOBAC; ethylene-responsive transcription factor ERF119-like | ||||
STRING | XP_009624644.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 7e-29 | ERF family protein |