PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009622960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 175aa MW: 19456.5 Da PI: 9.9309 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00041 | 87 | 107 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg+ Fs L H+r+H XP_009622960.1 87 CSICGMEFSLGQALGGHMRRH 107 ********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 7.71E-7 | 41 | 107 | No hit | No description |
PROSITE profile | PS50157 | 8.746 | 41 | 68 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 5.2 | 41 | 63 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 1.6E-7 | 41 | 65 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 43 | 63 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.64 | 85 | 107 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.619 | 85 | 112 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.4E-8 | 85 | 110 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 87 | 107 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MTAMKRSREY DTKVEAEAIA NCLMFFSHLN NKTSSNNHNE FECKTCNKCF PSFQAHGGHR 60 ASHKRPKLLA GAGDFLVQSK KNKMHGCSIC GMEFSLGQAL GGHMRRHRDE INKTSTAAGK 120 TIIPVVGKRI IPVLKQSNSS KMIFCLDLSL SPDENVDLKL WPTAPVSSPV LRCFF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009622960.1 | 1e-130 | PREDICTED: zinc finger protein ZAT12-like | ||||
Swissprot | Q9SLD4 | 2e-36 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A314KXL1 | 1e-107 | A0A314KXL1_NICAT; Zinc finger protein zat11 | ||||
STRING | XP_009622960.1 | 1e-129 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA366 | 24 | 150 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-38 | C2H2 family protein |