PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009620060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 293aa MW: 31900.3 Da PI: 4.9585 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 81 | 130 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g XP_009620060.1 81 SYVGVRKRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAAMSIKG 130 79****887.**********854...6**********************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.29E-30 | 80 | 140 | No hit | No description |
Pfam | PF00847 | 5.0E-12 | 80 | 130 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-33 | 81 | 144 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.0E-30 | 81 | 139 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.286 | 81 | 138 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-19 | 81 | 138 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 7.9E-9 | 82 | 93 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.9E-9 | 104 | 120 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MAEPTTPNSE SESSSYNSCS LSSTISSSSV LVKNINSKNR LKRCREEEEE NDGQTNISKC 60 SNSGSKKNGG NKTSDGSKHP SYVGVRKRAW GKWVSEIREP KKKSRIWLGT FATPEMAARA 120 HDVAAMSIKG GSAILNFPQV ADLLPRPVTC SPRDVQAAAV KAAHMDHLNP TESSPTPSSS 180 SSLSLVSGIT SSSCDDESTP TESEAEILPP PPPPAMLAPQ HEELSEIVKL PKLDTSYDSL 240 ESTQEVLRFI ESDWWDYGTN CEYYFGGENI NMGFTTGLEA VVSNSFESFL WQH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-18 | 76 | 139 | 9 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009620060.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor TINY-like | ||||
TrEMBL | A0A1S4BWP7 | 1e-165 | A0A1S4BWP7_TOBAC; ethylene-responsive transcription factor TINY-like | ||||
STRING | XP_009620060.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 6e-48 | ERF family protein |