PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009619193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 29044.7 Da PI: 4.9804 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.5e-19 | 66 | 116 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +++Wv+e+r+ps+ +kr++lg++ t+e+Aa+a++ a+++l+g+ XP_009619193.1 66 IYRGVRRRN-NNKWVCELREPSK---QKRIWLGTYPTPEMAARAHDIAALALRGN 116 69****887.8*********964...5*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.9E-13 | 65 | 115 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.68E-30 | 65 | 125 | No hit | No description |
SuperFamily | SSF54171 | 3.73E-21 | 66 | 125 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-28 | 66 | 125 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.878 | 66 | 123 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.2E-29 | 66 | 129 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-7 | 67 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-7 | 89 | 105 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MTNINSVSCS LDSIPANLER DYSQETSSSS SERLSSSLDE GIILLASSRP KKRAGRKKFK 60 ETRHPIYRGV RRRNNNKWVC ELREPSKQKR IWLGTYPTPE MAARAHDIAA LALRGNSATL 120 NFADSLWRLP VIVSKDPKDL RQAAVKAAEA FRQDPELVGV DYMNEEVNSN DEVKCQENVV 180 NGGGYDMEVK ELKMQNKEME NVLCCDWGEN SDMLEIEGSW QEKMGLLFSP TPRLGNCFSW 240 DDVESDVEVS LWNYSI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009619193.1 | 0.0 | PREDICTED: dehydration-responsive element-binding protein 1E-like | ||||
TrEMBL | A0A1S3ZYI8 | 1e-174 | A0A1S3ZYI8_TOBAC; dehydration-responsive element-binding protein 1D-like | ||||
STRING | XP_009619193.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA263 | 24 | 183 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 2e-45 | ERF family protein |