PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009616884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 565aa MW: 61866.9 Da PI: 6.5839 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.4 | 9.7e-31 | 310 | 368 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_009616884.1 310 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 368 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.3E-34 | 294 | 370 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.15E-28 | 302 | 370 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.838 | 304 | 370 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.5E-37 | 309 | 369 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.1E-27 | 311 | 368 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 565 aa Download sequence Send to blast |
MANGSGLFFD PDPTTLFLEY PSSKDHHFFY KLLKLEPFLS SNNIMDSLTK NMSSSPPTTI 60 QFPVNLINDH DQKRPILDEM DFFAAKEDVN CKDTDERKEF NKPLELDFNI NTGLQLLTAN 120 TSSDQSIVED GLSPASSEDR RTKTELAVLQ AELERINGEN RHLRDMLNQV TTNCSTLQMQ 180 LTMIKQKQQH DHVEQDDKGD EIKQQYQSSQ MRPRQFMDLG RLANEASLSS SEGRRSWEQS 240 RSPPMNIVES GSSDREDSPE KGLSCWGPNK VPRVAGNESK SSTTVDQATE ATIRKARVSV 300 RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC AEDKTILITT 360 YEGNHNHPLP PAAAAMASTT SSAARMLLSG SMPSADGLMS SNILARTLLP CSSSIATISA 420 SAPFPTVTLD LTQTSNPLQF KGPSNQSQFP FQNPHQNSPG NPIALLPQIF GQALYNQSKF 480 SGLQMSQNLS TLPSIGDTVN VLTADPNFAA ALATAVTSLI GNSHHSNNVT NNNTSAATTP 540 SNNNETINSS NGNNKVNSSS TSPAY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-22 | 296 | 372 | 1 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009616884.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 | ||||
Swissprot | Q9XEC3 | 1e-138 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A1S4CZL2 | 0.0 | A0A1S4CZL2_TOBAC; probable WRKY transcription factor 31 | ||||
STRING | XP_009616884.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA945 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 1e-122 | WRKY family protein |