PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009609405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 115aa MW: 13200.8 Da PI: 6.0901 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105 | 4.3e-33 | 21 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH++F++av+qLGG+e+AtPk+++++m+++gLtl+h+kSHLQkYRl XP_009609405.1 21 KPRLKWTPDLHQQFIDAVAQLGGPEEATPKSLMRVMNIHGLTLYHLKSHLQKYRL 75 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.717 | 18 | 78 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-30 | 19 | 78 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.99E-16 | 20 | 76 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.5E-23 | 21 | 76 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.4E-9 | 23 | 74 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
MALQNAQQNK DMNLLLSSDA KPRLKWTPDL HQQFIDAVAQ LGGPEEATPK SLMRVMNIHG 60 LTLYHLKSHL QKYRLGKSQA TDQSFDDNKQ EEFREPQSDK LYLDNCDGAQ NQMNE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-22 | 21 | 77 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-22 | 21 | 77 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-22 | 21 | 77 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-22 | 21 | 77 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-22 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009609405.1 | 2e-81 | PREDICTED: myb family transcription factor PHL8-like isoform X2 | ||||
Refseq | XP_016442363.1 | 2e-80 | PREDICTED: uncharacterized protein LOC107767787 isoform X2 | ||||
Swissprot | F4I274 | 5e-34 | PHL8_ARATH; Myb family transcription factor PHL8 | ||||
TrEMBL | A0A1S3XQY0 | 4e-79 | A0A1S3XQY0_TOBAC; uncharacterized protein LOC107767787 isoform X2 | ||||
STRING | XP_009777109.1 | 4e-75 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 2e-36 | G2-like family protein |
Publications ? help Back to Top | |||
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