PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009607270.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 231aa    MW: 25799.1 Da    PI: 8.569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009607270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-174191155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  + +Wv+e+r+ps+   +kr++lg++ tae+Aa+a++ a+++l+g
  XP_009607270.1 41 PVYRGVRRRN-NDKWVCELREPSK---QKRIWLGSYPTAEMAARAHDVAALALRG 91
                    68*****887.8*********964...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-124191IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2842101IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2042101IPR016177DNA-binding domain
PROSITE profilePS5103221.6674299IPR001471AP2/ERF domain
SMARTSM003802.5E-2742105IPR001471AP2/ERF domain
CDDcd000182.57E-2843101No hitNo description
PRINTSPR003675.2E-74354IPR001471AP2/ERF domain
PRINTSPR003675.2E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MNNSSTSIRV AVSDEEHINI LALRKPKKRA GRKKFKETRH PVYRGVRRRN NDKWVCELRE  60
PSKQKRIWLG SYPTAEMAAR AHDVAALALR GQLATLNFAD SAWRLQVPAS KDPKDLXAAK  120
AAEALWPGEE ADVNSRGAAN TGNGNEEMKV VSQEENAAYN CTQNIVTAEN VLYSNSCSEV  180
GMLGTQEWQA YMEERSLLSP NPCCLGSCFS WVMIWKVMLR CPCGVILFDS S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607270.11e-172PREDICTED: dehydration-responsive element-binding protein 1F-like
TrEMBLA0A1S4BPW81e-145A0A1S4BPW8_TOBAC; dehydration-responsive element-binding protein 1F-like
STRINGXP_009607270.11e-171(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.17e-29ERF family protein