PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009607196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | BES1 | ||||||||
Protein Properties | Length: 326aa MW: 35210.2 Da PI: 8.2884 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 211.7 | 1.9e-65 | 2 | 145 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kp ++++++g sas+sp+ss+q XP_009607196.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEDDGTTYRKGCKPVHHMDIIGGSASVSPCSSYQ 96 5899******************************************************************************************* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148 sp +sy++sp+sss+psp+s+ i + ++ +sl+p+l++ls+ ss XP_009607196.1 97 --------LSPGASYNPSPASSSIPSPVSSHYIANVQNnsdpNSLIPWLKNLSSGSS 145 ........788888888888888888888877655444567799*******998443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 6.4E-66 | 3 | 141 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WIVEDDGTTY RKGCKPVHHM DIIGGSASVS PCSSYQLSPG ASYNPSPASS SIPSPVSSHY 120 IANVQNNSDP NSLIPWLKNL SSGSSPSSSK FPHHLCIPGD SISAPVTPPS SSPTARTPRM 180 KDNWENPTAN STWIQHHYPF LPFSTPPSPG RQTPPDSGWL SGVQTPQDGP SSPTFSLVSS 240 NPFGFKEPLS NGGSRMWTPG QSGTCSPAVG AGMDQTADIP MSDVISAEFA FGSNVKGVVK 300 PWEGERIHEE CVSDDLELTL GNSSTR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975441 | 0.0 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009607196.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1 | ||||
Refseq | XP_009607197.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2 | ||||
Refseq | XP_016468029.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1 | ||||
Refseq | XP_016468030.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2 | ||||
Swissprot | Q9ZV88 | 1e-128 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A1S3ZUM4 | 0.0 | A0A1S3ZUM4_TOBAC; BES1/BZR1 homolog protein 4-like isoform X1 | ||||
STRING | XP_009607196.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1984 | 24 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 1e-101 | BES1/BZR1 homolog 4 |