PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_009607153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27983.5 Da PI: 6.2492 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.6 | 7.2e-21 | 13 | 141 | 6 | 128 |
NAM 6 rFhP.tdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 +F+P +d++l+ yL+k v g ++e+ + i ++d+y +P +L + + +++++ yfF++ +kk+a+gk+ nr +t g Wk ++k+ XP_009607153.1 13 EFQPyNDQDLI-SYLQKFVCGMPIET-DRIGHIDVYGNkKPCELFQdllcskEETSNDHVNYFFTQLKKKSASGKNYNRsITGGGSWKGRDTSKA 105 79995688898.9*************.88******97549****64466542222233455******************9999************ PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v++k+g+ +glkkt+ f + + ++ ++ W m+ey l XP_009607153.1 106 VHDKEGSIIGLKKTFRFDE-ECSDHQRIVWNMKEYCL 141 *****************96.555559*********87 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.793 | 8 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-10 | 13 | 141 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.72E-19 | 14 | 167 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence Send to blast |
MTTKSERRKC TTEFQPYNDQ DLISYLQKFV CGMPIETDRI GHIDVYGNKK PCELFQDLLC 60 SKEETSNDHV NYFFTQLKKK SASGKNYNRS ITGGGSWKGR DTSKAVHDKE GSIIGLKKTF 120 RFDEECSDHQ RIVWNMKEYC LSDNILEVLR QRCQIRHEDY VLCSVERKVN LCKHSQDIPS 180 EISSSALRYG GWPLYTELTK LPPLIDGPFE SLTEEELAFF DNPDPGYPQA YEKAYFNFYS 240 N |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009607153.1 | 0.0 | PREDICTED: NAC domain-containing protein 76-like | ||||
Refseq | XP_016458602.1 | 0.0 | PREDICTED: NAC domain-containing protein 76-like | ||||
TrEMBL | A0A1S3Z356 | 0.0 | A0A1S3Z356_TOBAC; NAC domain-containing protein 76-like | ||||
STRING | XP_009607153.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3381 | 10 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10490.1 | 1e-14 | NAC domain containing protein 52 |