PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009605887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21812.3 Da PI: 7.6706 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.8e-17 | 116 | 166 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ r++lg++ t +Aa+a++ a+ k++g XP_009605887.1 116 HYRGVRRRP-WGKFAAEIRDPTRK--GSRVWLGTYETDVDAARAYDCAAFKMRG 166 8********.**********8542..4**********99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.15E-29 | 115 | 174 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.5E-31 | 115 | 174 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-22 | 116 | 175 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.6E-13 | 116 | 166 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-36 | 116 | 180 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.487 | 116 | 174 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.9E-13 | 117 | 128 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.9E-13 | 156 | 176 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MTTRPEDEED EELTLELISQ HLLGDFTSTD FSFSTLPDDF QPVIFTSDQK PNHFDLHDNF 60 SEFETKPNII LSPTSVTTSV VSNTRIFDDS SLNRTDKKVD GSGYGSSVVE NGKKKHYRGV 120 RRRPWGKFAA EIRDPTRKGS RVWLGTYETD VDAARAYDCA AFKMRGRKAI LNFPFDAGNL 180 SPPANIGRKR RKG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 9e-29 | 113 | 175 | 2 | 64 | ATERF1 |
3gcc_A | 9e-29 | 113 | 175 | 2 | 64 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 192 | GRKRRKG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009605887.1 | 1e-142 | PREDICTED: ethylene-responsive transcription factor ERF106-like | ||||
TrEMBL | A0A1S4BQV7 | 1e-121 | A0A1S4BQV7_TOBAC; ethylene-responsive transcription factor ERF106-like | ||||
TrEMBL | A0A1U7YYY1 | 1e-121 | A0A1U7YYY1_NICSY; ethylene-responsive transcription factor ERF106 | ||||
STRING | XP_009605887.1 | 1e-141 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 4e-44 | ERF family protein |