PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009604673.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family TALE
Protein Properties Length: 640aa    MW: 72116.2 Da    PI: 6.7461
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009604673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.17.1e-093934301954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  XP_009604673.1 393 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 430
                     554459******************************88 PP

2BELL114.55.4e-37256324472
            BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     elqk+k+kLl++leeVd+rYk+y++q+++v+s Feavag g+a++Y +lA+ka+SrhFrcL+d i++qi
  XP_009604673.1 256 ELQKRKTKLLQMLEEVDRRYKHYCDQMKAVVSTFEAVAGNGAARVYSTLASKAMSRHFRCLRDGIVGQI 324
                     89*****************************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.3E-55190322IPR006563POX domain
PfamPF075261.2E-45196320IPR006563POX domain
PROSITE profilePS5007112.082371434IPR001356Homeobox domain
SMARTSM003895.8E-9374438IPR001356Homeobox domain
CDDcd000864.78E-11374435No hitNo description
SuperFamilySSF466895.13E-17375440IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27377440IPR009057Homeodomain-like
PfamPF059208.5E-18391430IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    Send to blast
MAGQESEEIK PRSMVTSTGY WYSDHTSTPS NIPNLVNHQL QSFETNPEIY NLTSGMEMIG  60
FPTNNPQVMW KGNFFNKTGG NSTGPSSSKS TNEQFYQHGN FTTSENMLLV SPTEDQAWHE  120
NNRLLVEDPS LRCVFPCEGN ERPSQGLSLS LCSSNPSSIG LQSFELRHQQ QIIQDGFLGK  180
AAANIQQQNQ GYYHQLKDSR YLGPAQELLV EFCSLGTKQN DHSSAKVLKQ QKSNQWEDEN  240
ASTSKKQTLQ SLDLLELQKR KTKLLQMLEE VDRRYKHYCD QMKAVVSTFE AVAGNGAARV  300
YSTLASKAMS RHFRCLRDGI VGQIKATKKA MGEKDTVVVP GTTRGETPRL RLLDQTLRQQ  360
KAFQQMNMME THPWRPQRGL PERSVSVLRA WLFEHFLHPY PSDVDKHILA RQTGLSRSQV  420
SNWFINARVR LWKPMVEEMY LEETKDQQEN LESPDGSKGL DHDMNGISVG RQINQNPQLH  480
IEDQKPNLVR IDSECISSII NHPEKNDTTN NNNKNCLQNH HQVHNLHSFG RGGDHSFGAI  540
ELDFSSYNHN STGAIAYGNE SVQHNIGGGV SLTLGLNQNG GSGMGLSTFS QASQSSLFYP  600
RDDHIDQDCQ QVQYSLLDSE NQNLPYRNLM GAQLLHDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15380438563Homeobox protein Meis2
3k2a_B2e-15380438563Homeobox protein Meis2
4xrm_A3e-15380438563Homeobox protein Meis2
4xrm_B3e-15380438563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4067000.0AF406700.1 Solanum tuberosum BEL1-related homeotic protein 14 (Bel14) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009604673.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_009604675.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_009604676.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_018627370.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_018627371.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_018627372.10.0PREDICTED: homeobox protein BEL1 homolog
SwissprotQ388971e-137BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A1S3ZQT40.0A0A1S3ZQT4_TOBAC; homeobox protein BEL1 homolog
STRINGXP_009604673.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53001317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-124TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]