PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009602361.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 341aa    MW: 37960.8 Da    PI: 4.262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009602361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-19108157154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s+ykGVr++k +g+W+AeIrd +     + +r++lg++ taeeA +a++  r+++e
  XP_009602361.1 108 SKYKGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYSTAEEASRAYELKRLEFE 157
                     89*******9.**********55.....45**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.18E-17108157IPR016177DNA-binding domain
PfamPF008472.7E-13108157IPR001471AP2/ERF domain
CDDcd000183.77E-25108149No hitNo description
Gene3DG3DSA:3.30.730.102.3E-22109157IPR001471AP2/ERF domain
PROSITE profilePS5103220.705109167IPR001471AP2/ERF domain
SMARTSM003801.8E-22109173IPR001471AP2/ERF domain
PRINTSPR003676.4E-10110121IPR001471AP2/ERF domain
PRINTSPR003676.4E-10132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MSELERQSSS DLENLKRNMK NKADTRPMRK IRIVCYDPDA TDSSDDEGIN DPKSKRFVRE  60
IKLQIGNSFT PPKASETECS FQDSNNGEQK PKSKALAKPL IQPRQGLSKY KGVRQRKWGK  120
WAAEIRDPFK GRRVWLGTYS TAEEASRAYE LKRLEFESMT KNSTNVSEKS SDDQNQTNTN  180
VASVSEDSAE SSASHTSHSL PSVLELYSFT SASASAPISG HNVNEKASDV ALEANVVEQE  240
VPELALIEET LSLAQISETM DLELELESFL VGADDFSQHL DEFVIDDFED PAVCVIEGDD  300
QLPTGLPDFD FDFDFDGYDE SFGLMDDAPR MNGTPLNIAC P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-121081501356Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602361.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1S3YNW40.0A0A1S3YNW4_TOBAC; ethylene-responsive transcription factor ERF118-like
STRINGXP_009602361.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-29ERF family protein