PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009600052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 176aa MW: 20349.9 Da PI: 7.6262 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.2 | 9.9e-17 | 7 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiy.kvePwdLpk....kvkaeekew..yfFskrdkkyatgkrknr.atksgyWkat 86 GfrF+P+d+e ++ +L + v g++ ++ + ++vd+y k ePw++ + + + e+++ +f +k +k + ++ r +r + ++g Wk+ XP_009600052.1 7 EEGFRFRPKDSEGLT-FLLRFVVGQEmYDA-GFiTTNVDVYgKQEPWEIYEhgvpCGDDEDSSSypHFITKLKK-K-SNARYHRaVGNKGSWKQD 97 68***********95.56666666661555.5526778*99456*****7335543333444442345444444.4.45788884677******* PP NAM 87 gkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 k k++++ +g k+ L + ++ ++ + +W+m+ey+l XP_009600052.1 98 AKGKPMVN-----IGSKTNLSYKNKefYPEDQKDGHWLMKEYEL 136 ******99.....66666666653321244445679******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.05E-15 | 3 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.272 | 6 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-11 | 8 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MGHLELEEGF RFRPKDSEGL TFLLRFVVGQ EMYDAGFITT NVDVYGKQEP WEIYEHGVPC 60 GDDEDSSSYP HFITKLKKKS NARYHRAVGN KGSWKQDAKG KPMVNIGSKT NLSYKNKEFY 120 PEDQKDGHWL MKEYELSKVI LHKFDQDCRD YVLCAIKKLK HVNSSSETST ITTLNN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009600052.1 | 1e-131 | PREDICTED: NAC domain-containing protein 78-like, partial | ||||
TrEMBL | A0A1S4DGC1 | 1e-102 | A0A1S4DGC1_TOBAC; protein NTM1-like 9 | ||||
STRING | XP_009600052.1 | 1e-131 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-10 | NAC domain containing protein 47 |