PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009599185.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 449aa    MW: 50205.2 Da    PI: 4.2881
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009599185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-2069130156
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.....kr.krfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr++  +g+WvAeIr+ +++ +      + kr +lg+f ta eAa a+++a+k+++g+
  XP_009599185.1  69 CKYRGVRQRT-WGKWVAEIREpVYNSNdyeyhSNgKRLWLGTFSTAIEAAIAYDEAAKAMYGH 130
                     79*****999.**********77774459986448*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.1E-1369130IPR001471AP2/ERF domain
CDDcd000182.00E-3069138No hitNo description
PROSITE profilePS5103222.15570137IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2070138IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.6E-2970138IPR001471AP2/ERF domain
SMARTSM003801.3E-3270143IPR001471AP2/ERF domain
PRINTSPR003672.4E-97182IPR001471AP2/ERF domain
PRINTSPR003672.4E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MSSHNFQRMR RRRNGSASIE ETLSMWKNQK QELNATLDGG IKKKTRKFPA QGSKKGCMRG  60
KGGPENLGCK YRGVRQRTWG KWVAEIREPV YNSNDYEYHS NGKRLWLGTF STAIEAAIAY  120
DEAAKAMYGH NATLNFPDYC VQNSELANYS TSVSIAQTTS SRIEPDLQTS DDGMVAITDE  180
KTILDDPTNL CSDGRADGAQ QDSSVCCLNM ESVVMEMDDS LDDIKGLNCS TGIDSEPILE  240
PTSSCVKVET PSDNDFVQDR RLECVDDPNK VSNSLHILHQ KTTDMKPNDS IFQHDVLRPN  300
ENYESGDQVL FPCDPIALPD YDCSVYALQE QPLDFRSFDN TSADIRSHLE YAEYLLMEDN  360
NTTETTTVSD IFWLNENIGE SYSLQSFLDE SFGVSNLNHS NGVLSKGGES NERCINIPGL  420
EDHGTEVNME DSYIPNSDFD ISSILGDIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1868137363ATERF1
3gcc_A2e-1868137363ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009599185.10.0PREDICTED: uncharacterized protein LOC104094874
TrEMBLA0A1S4AI720.0A0A1S4AI72_TOBAC; uncharacterized protein LOC107797978
STRINGXP_009599185.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79651530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-35ERF family protein