PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009599132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26324.5 Da PI: 5.5911 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.5 | 9.4e-15 | 80 | 127 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +GVr +k +g++ AeIrd + + k+++lg+f taeeA + + ++++eg XP_009599132.1 80 SGVRKRK-WGKYCAEIRDpF-----NkKKIWLGTFNTAEEASQVYQSKKLEFEG 127 8***999.**********55.....34****************99999988887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 16.002 | 78 | 140 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-6 | 79 | 90 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.3E-7 | 79 | 126 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.12E-14 | 80 | 129 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.97E-17 | 81 | 127 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 8.4E-18 | 81 | 128 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-11 | 81 | 146 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-6 | 101 | 117 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MKSQPKVTGE NNEKQQRKDE QIKIQRKIII KISDPDATES SSSEEEQENR PSRKQQPKLT 60 VHEIFQDKVK TTTFSSKLPS GVRKRKWGKY CAEIRDPFNK KKIWLGTFNT AEEASQVYQS 120 KKLEFEGKIK MAKIAKTNKG ISEKSELESK TSDSSNGVEG KGNNSSAGEE QEIGNNSVEE 180 LLKGQWIQIS DDKEVYISLK LGVPIVDNYG FLLGEFSELD DLSISVCDIE NDL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009599132.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF069-like isoform X1 | ||||
TrEMBL | A0A1S4BJX7 | 1e-166 | A0A1S4BJX7_TOBAC; ethylene-responsive transcription factor ERF069-like | ||||
STRING | XP_009599132.1 | 1e-167 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 1e-20 | ERF family protein |