PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009598818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 551aa MW: 60040.2 Da PI: 7.2927 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.7 | 1.6e-30 | 302 | 360 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_009598818.1 302 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGSHNHP 360 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.3E-33 | 286 | 362 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.01E-27 | 294 | 362 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.608 | 296 | 362 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-36 | 301 | 361 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.8E-26 | 303 | 360 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence Send to blast |
MDKGWGLTLE NSSDKVGFFN NKPFFGFNLS PRLNNIKGGE MFSGAEFPAD EKRGMVNEVD 60 FFSEKKSIHD DVVVKKGNSQ GNNTMRTGLF VNTGLQLVTA NTGISDQSTV DDGISSEVEE 120 KRTKNELAQL QVELERMNTE NQRLKGMLTQ VTNSYSALQM HLVTLMQQQQ QQQLISRTES 180 THNHVVVEVK SEEKNQEKDG NIVPRQFMEL GPSSTKADPM DEPTQSHSTS EERTLSGSPR 240 NNMELSRDKA IGREESPESE SWVPNKVPKL MNSSKPVEQT TEATMRKARV SVRARSEAPM 300 ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGSHNHP 360 LPPAAMAMAS TTSAAANMLL SGSMPSADGL MNTNFLARTI LPCSSNMATI SASAPFPTVT 420 LDLTQNPNAM SNYHQRNTAT QFQVPLPAGL NHPNFVGSMS TPQIPQVLGQ ALYNQSRFSG 480 LQVSQDNIQP PSFSDTLTAA TAAITADPNF TAALAAAISS IIGGSHPNNG NNSTSGPTSN 540 SNKTSSFLGN Q |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-22 | 288 | 364 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009598818.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 isoform X2 | ||||
Swissprot | Q9C519 | 1e-158 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A1S3Z416 | 0.0 | A0A1S3Z416_TOBAC; probable WRKY transcription factor 31 isoform X2 | ||||
TrEMBL | A0A1U7WGI9 | 0.0 | A0A1U7WGI9_NICSY; probable WRKY transcription factor 31 isoform X2 | ||||
STRING | XP_009598817.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-131 | WRKY family protein |