PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009593762.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 269aa MW: 29484.6 Da PI: 6.0942 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.7 | 1.3e-29 | 76 | 133 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+ XP_009593762.1 76 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYCSEHNHQ 133 99************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-30 | 66 | 135 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.112 | 69 | 135 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.89E-26 | 70 | 135 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-35 | 74 | 134 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.6E-25 | 76 | 133 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MEDRLNRRSP FFIKQEDSTG TPPDNAADSP FSGNETAEVN MPSPRKRRGA KKKVITVPII 60 DADGSRSKGE VYPPPDSWSW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRLDPT 120 TLLITYCSEH NHQFPVATTK HHHHHPLAAS TPTTSTNTAG DNNAAAAATD VTMTDKSSPE 180 ECDVFAYQHD NGFSEMAGEL GWFSDVGTPT FMENTSSVLG STWSDADVAL MLPIREEDQS 240 LFGDLGELPE CSVVFRRYSV EAPCCGGTG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 3e-20 | 52 | 135 | 6 | 79 | Disease resistance protein RRS1 |
5w3x_D | 3e-20 | 52 | 135 | 6 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009593762.1 | 0.0 | PREDICTED: probable WRKY transcription factor 69 isoform X2 | ||||
TrEMBL | A0A1S3ZD82 | 0.0 | A0A1S3ZD82_TOBAC; probable WRKY transcription factor 69 isoform X2 | ||||
STRING | XP_009593761.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 5e-64 | WRKY DNA-binding protein 69 |