PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009593761.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 270aa    MW: 29571.7 Da    PI: 6.0942
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009593761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-2977134359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+
  XP_009593761.1  77 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYCSEHNHQ 134
                     99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-3067136IPR003657WRKY domain
PROSITE profilePS5081131.11270136IPR003657WRKY domain
SuperFamilySSF1182909.02E-2671136IPR003657WRKY domain
SMARTSM007741.7E-3575135IPR003657WRKY domain
PfamPF031067.6E-2577134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MEDRLNRRSP FFIKQEDSTG TPPDNAADSP FSGNETAEVN MPSPRKSRRG AKKKVITVPI  60
IDADGSRSKG EVYPPPDSWS WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRLDP  120
TTLLITYCSE HNHQFPVATT KHHHHHPLAA STPTTSTNTA GDNNAAAAAT DVTMTDKSSP  180
EECDVFAYQH DNGFSEMAGE LGWFSDVGTP TFMENTSSVL GSTWSDADVA LMLPIREEDQ  240
SLFGDLGELP ECSVVFRRYS VEAPCCGGTG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-2053136679Disease resistance protein RRS1
5w3x_D3e-2053136679Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593761.10.0PREDICTED: probable WRKY transcription factor 65 isoform X1
TrEMBLA0A1S3ZDJ90.0A0A1S3ZDJ9_TOBAC; probable WRKY transcription factor 65 isoform X1
STRINGXP_009593761.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-64WRKY DNA-binding protein 69