PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009589605.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 361aa    MW: 39741.1 Da    PI: 6.7964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009589605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.8e-192071156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    +++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  XP_009589605.1 20 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 71
                    6799******.7*********....4456*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.79E-302078No hitNo description
PfamPF008473.4E-132070IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-202178IPR016177DNA-binding domain
PROSITE profilePS5103220.4682178IPR001471AP2/ERF domain
SMARTSM003804.6E-362184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-292178IPR001471AP2/ERF domain
PRINTSPR003671.2E-72233IPR001471AP2/ERF domain
PRINTSPR003671.2E-74460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MKLSSENIRT RRKPSSRGHP RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA  60
YDQAARTLRG ANARTNFELP ESDSHRGTNF ENAEPFNFEE ACRTEEPENG LVGALKAKLF  120
NSKSSRSFIQ AYASNSTSKA AIKPSVSSLE NKTTLSQTGQ AVTLARGLMC NNVEAEKLPK  180
RDITHVNNVG QGKNYSDTLF RGNQNLDYIS LMSSDHQPVI SSQLWQNNQY NSGTNSATMW  240
ANEQGRFPWG EPQMSRGHDE VLFSTTTNNN INIGIFGGGN STTCTWPMSV SVLGTSEPTV  300
DLSTFGEVDF LNAPVMMPHM NNGLTQAASV PTEQQMIFEN GLWSAGESAA WDPFLLSSVL  360
G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1519771271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762261.10.0PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A1J6IHZ30.0A0A1J6IHZ3_NICAT; Ethylene-responsive transcription factor rap2-11
STRINGXP_009589605.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18related to AP2 11