PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009589176.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 825aa MW: 93302.5 Da PI: 5.7381

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009589176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50	5.9e-16	636	680	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is ++l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ k XP_009589176.1 636 GISRSVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPRSK 680 6999**************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.843	621	706	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	2.6E-4	622	672	IPR009057	Homeodomain-like
Pfam	PF02042	4.2E-13	637	680	IPR003035	RWP-RK domain
SuperFamily	SSF54277	6.87E-17	738	823	No hit	No description
PROSITE profile	PS51745	18.234	741	825	IPR000270	PB1 domain
SMART	SM00666	2.4E-15	741	824	IPR000270	PB1 domain
Pfam	PF00564	7.6E-15	742	823	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	3.7E-15	743	822	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence Send to blast
MPIELKFSYR KRGDGINRWV FWTQHNGDEL NQVKSLFPVL RDSTQPDTNG DSQLNRLTIK 60 NLVELLDVQG TCLIQFWAPI RINSGKTFLT TADQPFAFNG KIHEGLWAYR RVSLLTIASV 120 DSTEIDETKR VHVHGRPARV FRSGMPEFSP HVRYYYMDEY PLRNFAMCLG VGSYWTLPVF 180 ESSGDRCIGV LEYAFEANVG LDLYSTLDCL INNHRILKTM GLALIPSWLA CSQEIQEVWE 240 QELAKVKEAL EVTCKTHRLL FAQTWISVLD SSRTQMLITS PPTKYWSEEI TSLEFLAVSD 300 LHHVRIGQGL VGKVLSSKGS CFCRDITQLS IDFYPFVPIA RCAGFTACFA IFVRLNSACH 360 MVLEFFLPND ETLDRNPQSF LSKLLATIRE QLPSFFLDSG PSLFVEVIRT APVDELDSFE 420 ISQLQQGVRS KGNEKMVLFD SLNQDSADLG PSSSTDIGAH HMEIAKDTPD NGEETVLPDS 480 AHKQGVEEAD AMDKEKSSVD FILATSFAVS EKKLQQNLST DKASLDEKLD SFEIGHRQLP 540 SMVQYDTINQ IFGFDPSSSS DLEEIITADY GRDTQLNLQS KKRGESTQPD LAHQQRVEEA 600 DVGDKRRHSV HVEENANSHN CPEKHKRIKR IEKEYGISRS VLEEQFGKKL SDAAKSLGVA 660 RSTLKRMCRD YDIYRWPRSK SANDVCSLSE NKPVKRVENQ TGNSSREDLQ LPHAGLSNGM 720 DTTTTLTQRK KPTATFQSDN AMSVKVTYKD VTIRFPFSLS SGKIDLETEV EKRLKLVLIG 780 SYSIKYEDED NDWIAITCDS DLEYGMHTLR SLGRTTMKML VEPLN

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence Send to blast

MPIELKFSYR KRGDGINRWV FWTQHNGDEL NQVKSLFPVL RDSTQPDTNG DSQLNRLTIK  60
NLVELLDVQG TCLIQFWAPI RINSGKTFLT TADQPFAFNG KIHEGLWAYR RVSLLTIASV  120
DSTEIDETKR VHVHGRPARV FRSGMPEFSP HVRYYYMDEY PLRNFAMCLG VGSYWTLPVF  180
ESSGDRCIGV LEYAFEANVG LDLYSTLDCL INNHRILKTM GLALIPSWLA CSQEIQEVWE  240
QELAKVKEAL EVTCKTHRLL FAQTWISVLD SSRTQMLITS PPTKYWSEEI TSLEFLAVSD  300
LHHVRIGQGL VGKVLSSKGS CFCRDITQLS IDFYPFVPIA RCAGFTACFA IFVRLNSACH  360
MVLEFFLPND ETLDRNPQSF LSKLLATIRE QLPSFFLDSG PSLFVEVIRT APVDELDSFE  420
ISQLQQGVRS KGNEKMVLFD SLNQDSADLG PSSSTDIGAH HMEIAKDTPD NGEETVLPDS  480
AHKQGVEEAD AMDKEKSSVD FILATSFAVS EKKLQQNLST DKASLDEKLD SFEIGHRQLP  540
SMVQYDTINQ IFGFDPSSSS DLEEIITADY GRDTQLNLQS KKRGESTQPD LAHQQRVEEA  600
DVGDKRRHSV HVEENANSHN CPEKHKRIKR IEKEYGISRS VLEEQFGKKL SDAAKSLGVA  660
RSTLKRMCRD YDIYRWPRSK SANDVCSLSE NKPVKRVENQ TGNSSREDLQ LPHAGLSNGM  720
DTTTTLTQRK KPTATFQSDN AMSVKVTYKD VTIRFPFSLS SGKIDLETEV EKRLKLVLIG  780
SYSIKYEDED NDWIAITCDS DLEYGMHTLR SLGRTTMKML VEPLN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009589176.1	0.0	PREDICTED: protein NLP7-like isoform X2
TrEMBL	A0A1U7WUY0	0.0	A0A1U7WUY0_NICSY; protein NLP7-like isoform X4
STRING	XP_009589173.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-41	NIN like protein 7