PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009588241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17954.3 Da PI: 8.0242 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.5 | 1.4e-12 | 12 | 59 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 ++GVr +k +g++ AeI++ + + k ++lg+f taeeA++ + ++++ XP_009588241.1 12 LFPGVRSRK-NGKFCAEIKHpF-----NkKIIWLGTFITAEEAYEVYKSKKLEF 59 689***888.8*********55.....34****************998877766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.13E-13 | 11 | 52 | No hit | No description |
SuperFamily | SSF54171 | 4.45E-11 | 11 | 63 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 12.971 | 12 | 69 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.5E-5 | 12 | 66 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.2E-13 | 13 | 61 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MKSQKRTPKK SLFPGVRSRK NGKFCAEIKH PFNKKIIWLG TFITAEEAYE VYKSKKLEFD 60 KKVMAKNAKK SKKSENSEEE TCSSNKSNGV EERSNSSAGE EQEIGNNSDE ELLMGQWVQI 120 SEEKEVYFSS KLGVPIVDNY GFLLGEFSEL DDLRFCM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009588241.1 | 1e-111 | PREDICTED: ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A1J6HS91 | 3e-63 | A0A1J6HS91_NICAT; Ethylene-responsive transcription factor erf118 | ||||
STRING | XP_009588241.1 | 1e-110 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 4e-13 | ERF family protein |