PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009587851.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 199aa    MW: 22329.1 Da    PI: 9.4128
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009587851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-1982131356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+W+AeIrdp     +  +r++lg+f taeeAa+a+++ + +++ge
  XP_009587851.1  82 YRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFVTAEEAARAYDKKAIEFRGE 131
                     9*******.**********7.....337*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-3281139IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2381140IPR016177DNA-binding domain
SMARTSM003801.3E-3681144IPR001471AP2/ERF domain
PROSITE profilePS5103223.9281138IPR001471AP2/ERF domain
PRINTSPR003679.2E-128293IPR001471AP2/ERF domain
CDDcd000181.57E-3082140No hitNo description
PfamPF008471.3E-1282131IPR001471AP2/ERF domain
PRINTSPR003679.2E-12104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MVSALRHVIS GADGRTDGEG AAQLLREIEN ASAATSLPRR SIVEPTASAT TYLACRTSFH  60
VKPENLELQK GRKRRRNTKK EYRGVRQRPW GKWAAEIRDP HKAQRVWLGT FVTAEEAARA  120
YDKKAIEFRG EKAKTNFPIS EYATTVSSTD HNNKLPMVVE ELQVQNGVSN GEVNVAGDDF  180
WDTLEEDGLV KWITKDMSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-2280139464ATERF1
3gcc_A8e-2280139464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17175RKRRR
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587851.21e-143PREDICTED: uncharacterized protein LOC104085503
SwissprotQ9ZWA26e-29ERF77_ARATH; Ethylene-responsive transcription factor 10
TrEMBLA0A1S3XMC11e-126A0A1S3XMC1_TOBAC; ethylene-responsive transcription factor ERF071-like
STRINGXP_009587851.11e-146(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.22e-31ERF family protein
Publications ? help Back to Top
  1. Lehmeyer M, et al.
    Functional dissection of a strong and specific microbe-associated molecular pattern-responsive synthetic promoter.
    Plant Biotechnol. J., 2016. 14(1): p. 61-71
    [PMID:25819608]